Tree cavity densities and characteristics in managed and unmanaged Swedish boreal forest

In forests worldwide, ～10?40% of bird and mammal species require cavities for nesting or roosting. Although knowledge of tree cavity availability and dynamics has increased during past decades, there is a striking lack of studies from boreal Europe. We studied the density and characteristics of cavities and cavity-bearing trees in three categories of forest in a north-Swedish landscape: clearcuts with tree retention, managed old (>100 years) forest, and unmanaged old forest. Unmanaged old forests had significantly higher mean density of cavities (2.4?±?2.2(SD)?ha^?1) than managed old forest (1.1?±?2.1?ha^?1). On clearcuts the mean cavity density was 0.4?±?2.3?ha^?1. Eurasian aspen (Populus tremula) had a higher probability of containing excavated cavities than other tree species. There was a greater variety of entrance hole shapes and a higher proportion of cavities with larger entrances in old forest than on clearcuts. Although studies of breeding success will be necessary to more accurately assess the impact of forest management on cavity-nesting birds, our results show reduced cavity densities in managed forest. To ensure future provision of cavities, managers should retain existing cavity-bearing trees as well as trees suitable for cavity formation, particularly aspen and dead trees.     

International standards for the diagnosis of regulated pests

For the last 10 years, the European and Mediterranean Plant Protection Organization (EPPO) has run a European Panel on diagnostics, which has developed regional standards on diagnostic protocols. Nearly 80 such standards have now been approved, and are in active use in EPPO countries. In 2003, the Commission for Phytosanitary Measures (CPM) of FAO, in reviewing global needs for International Standards for Phytosanitary Measures (ISPMs), recognized that there is a strong interest in developing diagnostic protocols for all contracting parties to the International Plant Protection Convention (IPPC). Such protocols would support the harmonization of detection and identification procedures worldwide, contribute to greater transparency and comparability in the diagnostics for regulated pests, and assist in the resolution of disputes between trading partners. In addition, such protocols would be very useful in technical assistance programmes. In 2004, the CPM adopted a mechanism for rapid development of ISPMs in specific areas, particularly suitable for diagnostic protocols. A Technical Panel was accordingly established to develop protocols for specific pests and meets on an annual basis. A format for international diagnostic protocols was adopted in 2006 and a list of priority pests was established. In 2003, EPPO initiated a new programme on quality management and accreditation for plant pest laboratories and Standards are now also being developed in this area. In 2006, a survey of existing diagnostic capacities in EPPO member countries was undertaken and a database on diagnostic expertise was created.     

Population structure of short‐finned pilot whales in the oceanic archipelago of Madeira based on photo‐identification and genetic analyses: implications for conservation

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Mass spectrometry-based metabolomics to elucidate functions in marine organisms and ecosystems

Marine systems are very diverse and recognized as being sources of a wide range of biomolecules. This review provides an overview of metabolite profiling based on mass spectrometry (MS) approaches in marine organisms and their environments, focusing on recent advances in the field. We also point out some of the technical challenges that need to be overcome in order to increase applications of metabolomics in marine systems, including extraction of chemical compounds from different matrices and data management. Metabolites being important links between genotype and phenotype, we describe added value provided by integration of data from metabolite profiling with other layers of omics, as well as their importance for the development of systems biology approaches in marine systems to study several biological processes, and to analyze interactions between organisms within communities. The growing importance of MS-based metabolomics in chemical ecology studies in marine ecosystems is also illustrated.     

Effects of different commercial diets on growth performance,health and resistance to Tetrahymena sp. infection in guppies,Poecilia reticulata (Peters)

The effects of feeding guppy fry, Poecilia reticulata (Peters), different commercial diets from BernAqua [MeM (R = Regular, O = Ornamental and P = Premium) and experimental feed (EF] and Ocean Nutrition (ON) on growth was tested for 57 days. Health status and resistance to Tetrahymena infection were analysed at the end of the trial. The highest growth was obtained in fish fed MeM Regular and MeM Premium (mean final weights of 427 and 417 mg respectively). Fish fed EF had a significantly higher rate of spinal deformity (12.7%) than all other feeding groups (3.05% or less). Histological analysis revealed the accumulation of liver glycogen and/or lipid in fish from all feeding groups; fat accumulation in the abdomen was most pronounced in the EF and MeM Regular‐fed fish, and muscle dystrophy was observed in ca. 50% of the fish from all feeding groups except the MeM Ornamental‐fed group. The highest mortality following Tetrahymena infection occurred in fish fed EF (87%) and the lowest mortality in the MeM Ornamental‐fed fish (58%). Mortalities in all other feeding groups ranged between 69% and 76%. In summary, MeM Ornamental feed provided a moderate weight gain, no muscle dystrophy, negligible deformity and the greatest resistance to parasitic infection.     

Composition and Distribution of Pentosans in Millstreams of Different Hard Spring Wheats

Six commercially grown samples of hard spring wheat were milled using a tandem Buhler laboratory mill. Individual flour streams and branny by‐products, as well as whole‐grain wheat and straight‐grade flour, were characterized in terms of total (TP), water‐extractable (WEP), and water‐unextractable (WUP) pentosans. One representative cultivar sample was analyzed for its ratio of arabinose to xylose (A/X). TP and WEP of whole grain wheat of the six samples had ranges of 5.45–7.32% and 0.62–0.90% (dm), respectively. Neither TP nor WEP of whole grain was related to ash content variation. There was significant variation in the distribution and composition of pentosans in 16 millstreams of all the wheat samples, including bran and shorts fractions; TP and WEP contents had ranges of 1.69–32.4% and 0.42–1.76% (dm), respectively. When ash contents exceeded ≈0.6% (dm), strong positive correlations were obtained between ash and TP contents, and between ash and WUP contents for all the millstreams. Among bran and shorts fractions, TP and WUP content increased in the order of coarse bran > fine bran > shorts; while WEP, WEP/WUP and A/X showed the opposite pattern of variation of shorts > fine bran > coarse bran. Bran and shorts fractions had pentosan contents several times higher than would be predicted from the relationship between pentosan and ash contents of the flour streams. Pentosans therefore represented a much more sensitive marker of flour refinement compared with ash content. Pentosans of endosperm were substantially different in their extractability and composition from those of bran. On this basis, different functionalities of pentosans of bran and endosperm would be expected. Results demonstrated the importance of milling extraction and millstream blending in the functionality and quality of wheat flour for breadmaking.     

Marine Sources of Furan Fatty Acids

The furan fatty acid (F-fatty acid) content was determined in different marine sources as well as in commercially available marine oil products that claim to be health promoting. The five F-fatty acids typically representing the majority of F-fatty acids in fish, 9M5 (9-(3-methyl-5-pentylfuran-2-yl)-nonanoic acid), 9D5 (9-(3-dimethyl-5-pentylfuran-2-yl)-nonanoic acid), 11D3 (11-(3,4-Dimethyl-5-propylfuran-2-yl)-undecanoic acid), 11D5 (11-(3,4-Dimethyl-5-pentylfuran-2-yl)-undecanoic acid), and 11M5 (11-(3-Methyl-5-pentylfuran-2-yl)-undecanoic acid) were measured as methyl esters using a gas chromatograph linked with a tandem mass spectrometer (GC/MS-MS). The results showed a significant difference in F-fatty acid levels between the different marine oil products analyzed, depending on the source of raw material. Of the 11 different Icelandic marine catches analyzed, the highest total amount of F-fatty acids was found in the farmed fish.     

Colony‐specific differences in decadal longitudinal body composition of a capital‐breeding marine top predator

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Production performance and plasma metabolite concentrations of broiler chickens fed low crude protein diets differing in Thr and Gly

The aim of the study was to test the interaction between Thr and Gly in low crude protein (CP) diets in 7 to 28 d broilers on production performance and plasma metabolites. A total of 2,040 broilers were allocated to 17 treatments. A positive control (PC) diet (20.5% CP) was formulated to be adequate in dietary Thr and Gly. A negative control (NC) diet (18.5% CP, deficient in Thr and Gly) was supplemented with crystalline l-Thr and Gly to obtain a 4 Thr × 4 Gly design. Dietary Thr was tested at an apparent faecal digestibility (AFD) Thr-to-Lys ratio, which was 55%, 58%, 61% or 64%, and dietary Gly was tested at an AFD (Gly + Ser)-to-Lys ratio, which was 135%, 142%, 149% or 156%. Plasma samples were collected at 28 d. The low CP diet, formulated at 64% Thr and 156% Gly, resulted in a higher body weight gain (BWG) (P < 0.01) and similar feed conversion ratio (FCR) as the high CP treatment (PC). FCR was improved (P < 0.001) by l-Thr supplementation. Quadratic response to dietary Thr was significant for feed intake (FI), BWG and FCR (P < 0.01). A near-significant interaction for Thr × Gly was observed for FI and BWG (P_linear = 0.091 and P = 0.074, respectively). Gly did not affect production performance. An interaction between Thr × Gly on plasma free AA level was observed (P < 0.05). Free AA concentration in plasma linearly decreased with increase in AFD Thr-to-Lys ratio, and increased with increase in AFD (Gly + Ser)-to-Lys ratio. Plasma uric acid concentration was higher in PC than in all of the other diets, and plasma triglyceride concentration was decreased by l-Thr supplementation, but not by Gly. In conclusion, Gly was not limiting for growth at low dietary CP level unless Thr was deficient, showing that adequate amounts of Thr in broiler diets can overcome marginal supply of Gly and Ser and allow reduction of dietary CP from 20.5% to 18.5% for broilers from 7 to 28 d of age.